Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 RACGAP1-201ENST00000312377 3073 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 SYNJ2-201ENST00000355585 7378 ntAPPRIS P2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 FKBP5-204ENST00000542713 7384 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 KLHL1-202ENST00000545028 3966 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 DHX8-201ENST00000262415 5558 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PNMA8A-202ENST00000438932 3335 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 MYO1H-201ENST00000310903 4364 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 NTRK3-221ENST00000629765 2714 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF175-201ENST00000262259 6535 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 CMSS1-201ENST00000421999 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PSD4-205ENST00000441564 11234 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 ARID5B-202ENST00000309334 3141 ntTSL 5 BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 TBC1D5-219ENST00000446818 3124 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
KRTAP3-3Q9BYR6 PTGS1-207ENST00000619306 5051 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CALML3-AS1-202ENST00000543008 4531 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 GAS7-201ENST00000323816 8033 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 GAS7-204ENST00000437099 8003 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AL590491.1-201ENST00000611916 1988 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 EXOC7-220ENST00000607838 3353 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 NR2F1-AS1-202ENST00000504474 2868 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CACNA1C-202ENST00000335762 6968 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CLNK-201ENST00000226951 5599 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF43-202ENST00000357491 5249 ntAPPRIS ALT2 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 TTC5-201ENST00000258821 4779 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SLITRK1-201ENST00000377084 5189 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 TAC4-202ENST00000334568 675 ntAPPRIS P4 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SERF2-202ENST00000339624 506 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AL159987.1-201ENST00000347911 293 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SNORA63.2-201ENST00000362603 126 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SNORA25.9-201ENST00000365087 128 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CENPW-201ENST00000368325 528 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 DEFA1-202ENST00000382692 485 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU1-67P-201ENST00000384446 164 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR633-201ENST00000384821 98 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 MIR325-201ENST00000385260 98 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SNORA48B-201ENST00000390912 135 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AL627390.1-201ENST00000396055 340 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RPL7AP49-201ENST00000429522 581 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AL591438.1-201ENST00000433508 581 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC064862.2-201ENST00000445460 196 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 HMGN2P10-201ENST00000448085 265 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 Y_RNA.714-201ENST00000517065 90 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RNU6-1096P-201ENST00000517089 102 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 IGKV2-29-201ENST00000521304 372 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC087164.1-201ENST00000577847 513 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RN7SL712P-201ENST00000579354 308 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC103809.1-201ENST00000585167 651 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC009061.2-204ENST00000602476 524 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC018554.3-201ENST00000614215 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AK2-214ENST00000626911 160 ntTSL 3 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC233280.19-201ENST00000633223 136 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 NTPCR-202ENST00000366628 6311 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SLC24A1-203ENST00000399033 3323 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 MELK-201ENST00000298048 2485 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ALDOB-201ENST00000374855 2451 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AP000892.3-201ENST00000624094 5326 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 PLEKHA3-201ENST00000234453 13880 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 RBFOX1-223ENST00000620507 4018 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 SP1-202ENST00000426431 7603 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 AC010478.1-201ENST00000601500 6762 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CEP135-201ENST00000257287 5562 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 GSN-AS1-201ENST00000414544 4763 ntBASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 DMGDH-201ENST00000255189 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ABL2-206ENST00000504405 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 GUCY1A3-202ENST00000393832 4286 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 ADGRF4-203ENST00000371220 3075 ntTSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 FBN2-204ENST00000508053 11132 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
KRTAP3-3Q9BYR6 TTC23-203ENST00000394132 3849 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms