Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 LINC01761-201ENST00000424943 2755 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 GANAB-201ENST00000346178 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ATP6V0A1-202ENST00000343619 4128 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RTN3-206ENST00000377819 4937 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 DSG4-201ENST00000308128 3579 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 GBP2-201ENST00000370466 2220 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 CLTCL1-202ENST00000427926 5513 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SIM1-201ENST00000262901 3999 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TNFRSF11B-201ENST00000297350 2402 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TTLL5-221ENST00000557636 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ADIPOQ-201ENST00000320741 4562 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 CFHR5-201ENST00000256785 2810 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 COL4A6-201ENST00000334504 6700 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 Y_RNA.12-201ENST00000362393 112 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP93-201ENST00000363838 309 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RNU4-16P-201ENST00000364737 141 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RNU6-975P-201ENST00000384296 105 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MIR296-201ENST00000385215 80 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SNORD77B-201ENST00000391112 67 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MIR1282-201ENST00000408865 101 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP236-201ENST00000410635 284 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP136-201ENST00000410927 300 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP167-201ENST00000411047 285 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP137-201ENST00000411074 307 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC069218.2-201ENST00000411665 344 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 THEM7P-201ENST00000419556 672 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL161447.1-201ENST00000427811 230 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC246785.1-201ENST00000440916 264 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SNRPGP13-201ENST00000442212 177 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 GEMIN8P3-201ENST00000445417 720 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RPL23AP28-201ENST00000448062 470 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 HIST1H2APS6-201ENST00000448609 364 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SL308P-201ENST00000464971 297 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TUBBP11-201ENST00000472255 252 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 UBL5P1-201ENST00000507979 193 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 LINC01969-201ENST00000514468 455 ntTSL 3 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC117383.2-201ENST00000514722 322 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RN7SKP66-201ENST00000516681 231 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ACA59.2-201ENST00000517061 156 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RNU6-840P-201ENST00000517275 65 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC106028.1-201ENST00000554322 526 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL133371.3-201ENST00000556197 549 ntTSL 4 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MIR4682-201ENST00000580643 80 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MIR5003-201ENST00000581891 99 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC005332.4-201ENST00000592752 579 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SNORD11B-201ENST00000607707 90 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL451054.3-201ENST00000611115 776 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL591926.8-201ENST00000616876 211 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL590491.1-202ENST00000618038 394 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 U6.103-201ENST00000637085 61 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TSPAN18-201ENST00000340160 4229 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 APOBEC4-201ENST00000308641 2650 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 MOBP-202ENST00000383754 3051 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 PROX2-202ENST00000556489 3878 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 DCLRE1B-201ENST00000369563 3940 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RHPN2-201ENST00000254260 3500 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 CEP95-203ENST00000556440 3139 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 LRTOMT-201ENST00000289488 2332 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 C17orf75-201ENST00000225805 4581 ntAPPRIS ALT1 TSL 5 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SDCBP-212ENST00000523483 3589 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 PDLIM5-219ENST00000514743 3356 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 SALL2-201ENST00000450879 3178 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 TTC39A-212ENST00000447632 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 UVSSA-201ENST00000324803 4441 ntBASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 LINC01347-202ENST00000627498 3841 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 CALD1-201ENST00000361675 3612 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AHNAK2-204ENST00000557457 3436 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AASS-202ENST00000393376 3233 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 KIAA0100-202ENST00000528896 7407 ntAPPRIS P2 TSL 1 (best) BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 AC011632.1-202ENST00000518128 2810 ntTSL 2 BASIC2.87□□□□□ -1.95
KRTAP4-9Q9BYQ8 UTP15-201ENST00000296792 3687 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms