Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC23.62■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
TNFRSF11AQ9Y6Q6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 DUT-205ENST00000558813 769 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC23.59■■□□□ 1.37
TNFRSF11AQ9Y6Q6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 AL032819.2-201ENST00000624543 2162 ntBASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 CKBP1-201ENST00000565489 1086 ntBASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
TNFRSF11AQ9Y6Q6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
TNFRSF11AQ9Y6Q6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.36
TNFRSF11AQ9Y6Q6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
TNFRSF11AQ9Y6Q6 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms