Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 KRT18P68-201ENST00000392293 1000 ntBASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 LSM12P1-201ENST00000411836 588 ntBASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 AL138781.1-201ENST00000566567 1274 ntBASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 AL589743.5-201ENST00000616611 1050 ntBASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.47■□□□□ 0.55
AP4B1Q9Y6B7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 AC090164.3-201ENST00000610780 2143 ntBASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 NOC2LP1-202ENST00000452600 2235 ntBASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
AP4B1Q9Y6B7 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 AL355472.2-201ENST00000422958 438 ntBASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 AC069152.1-201ENST00000438030 544 ntBASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 AC087633.2-202ENST00000565166 1439 ntBASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 AC009237.14-201ENST00000609975 1594 ntBASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.45■□□□□ 0.54
AP4B1Q9Y6B7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 AC068880.1-201ENST00000507289 2297 ntBASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
AP4B1Q9Y6B7 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms