Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 MIR2861-201ENST00000636310 90 ntBASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.97■■□□□ 1.11
R3HCC1Q9Y3T6 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 AC135050.7-201ENST00000624508 2218 ntBASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 AC073210.2-201ENST00000430369 194 ntBASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
R3HCC1Q9Y3T6 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC21.95■■□□□ 1.11
R3HCC1Q9Y3T6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 TMEM179-206ENST00000616017 1645 ntBASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 DUSP5P2-201ENST00000426873 1033 ntBASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 LINC01465-201ENST00000408887 1940 ntBASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
R3HCC1Q9Y3T6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 AC139713.2-201ENST00000641328 2723 ntBASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
R3HCC1Q9Y3T6 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
R3HCC1Q9Y3T6 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms