Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHMP2BQ9UQN3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 AP006587.1-201ENST00000534129 1502 ntBASIC19.58■□□□□ 0.73
CHMP2BQ9UQN3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.58■□□□□ 0.72
CHMP2BQ9UQN3 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 ANKRD18DP-204ENST00000455355 1975 ntBASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 WT1-AS_3.1-201ENST00000613262 234 ntBASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AC104581.1-202ENST00000635932 2618 ntBASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CHMP2BQ9UQN3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 GUSBP6-202ENST00000438529 1198 ntBASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 YBX1P10-201ENST00000444752 975 ntBASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 AL121906.2-201ENST00000621597 723 ntBASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC19.56■□□□□ 0.72
CHMP2BQ9UQN3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms