Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PCDHA4Q9UN74 AC141586.3-201ENST00000562166 1838 ntBASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 MESTP1-201ENST00000404287 994 ntBASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 AC011506.1-201ENST00000474329 610 ntBASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PCDHA4Q9UN74 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 AC004951.3-201ENST00000418645 1148 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 AC008040.2-201ENST00000461049 708 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 B3GAT3P1-201ENST00000471720 806 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 AC091390.4-202ENST00000476426 537 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 AC093827.2-201ENST00000512654 315 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MIR6786-201ENST00000616843 113 ntBASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHA4Q9UN74 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 DERL1-203ENST00000419562 918 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 TSPY7P-201ENST00000431358 1114 ntBASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 AC116562.2-201ENST00000507042 360 ntBASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 AC026471.5-201ENST00000615068 467 ntBASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 AC130371.2-201ENST00000619443 611 ntBASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHA4Q9UN74 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 SNORA78-201ENST00000459373 127 ntBASIC22■■□□□ 1.11
PCDHA4Q9UN74 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC22■■□□□ 1.11
PCDHA4Q9UN74 AC011298.2-201ENST00000617989 482 ntBASIC22■■□□□ 1.11
PCDHA4Q9UN74 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHA4Q9UN74 FSCN1P1-201ENST00000568912 1481 ntBASIC22■■□□□ 1.11
PCDHA4Q9UN74 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms