Protein–RNA interactions for Protein: Q9UMQ6

CAPN11, Calpain-11, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11Q9UMQ6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 KRT18P16-201ENST00000510337 1294 ntBASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 AC083906.2-201ENST00000511578 360 ntBASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CAPN11Q9UMQ6 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 AC090164.3-201ENST00000610780 2143 ntBASIC20.83■□□□□ 0.92
CAPN11Q9UMQ6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 AL121832.2-201ENST00000610979 668 ntBASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 AC007613.1-201ENST00000572811 2597 ntBASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CAPN11Q9UMQ6 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 AC135050.7-201ENST00000624508 2218 ntBASIC20.81■□□□□ 0.92
CAPN11Q9UMQ6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 HLA-B-256ENST00000639848 1089 ntBASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CAPN11Q9UMQ6 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms