Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 METTL23-204ENST00000586752 904 ntTSL 2 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 AL023803.3-201ENST00000615559 522 ntBASIC19.44■□□□□ 0.7
MBD1Q9UIS9 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 AC009237.14-201ENST00000609975 1594 ntBASIC19.44■□□□□ 0.7
MBD1Q9UIS9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
MBD1Q9UIS9 GOLGA2P11-201ENST00000562660 1621 ntBASIC19.43■□□□□ 0.7
MBD1Q9UIS9 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 AC011558.1-201ENST00000623459 338 ntBASIC19.43■□□□□ 0.7
MBD1Q9UIS9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 AC141257.4-201ENST00000634557 245 ntBASIC19.43■□□□□ 0.7
MBD1Q9UIS9 AC136944.6-201ENST00000634818 245 ntBASIC19.43■□□□□ 0.7
MBD1Q9UIS9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
MBD1Q9UIS9 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 MED17-221ENST00000639724 2317 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 SLC25A24-204ENST00000569674 2357 ntBASIC19.42■□□□□ 0.7
MBD1Q9UIS9 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 AP001271.2-201ENST00000624018 1556 ntBASIC19.42■□□□□ 0.7
MBD1Q9UIS9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
MBD1Q9UIS9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.41■□□□□ 0.7
MBD1Q9UIS9 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 AC092647.4-201ENST00000457211 535 ntBASIC19.4■□□□□ 0.7
MBD1Q9UIS9 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 KRT8P8-201ENST00000434750 1448 ntBASIC19.4■□□□□ 0.7
MBD1Q9UIS9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
MBD1Q9UIS9 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.7
MBD1Q9UIS9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
MBD1Q9UIS9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
MBD1Q9UIS9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms