Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 TUBB8P6-201ENST00000436895 1288 ntBASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NME1-207ENST00000480143 964 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 THEM4-205ENST00000489410 643 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 ITM2C-210ENST00000620962 501 ntBASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC12.54□□□□□ -0.4
LINC00474Q9P2X8 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 NBPF21P-201ENST00000425093 1451 ntBASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 MTDHP1-201ENST00000605323 784 ntBASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LINC00474Q9P2X8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LINC00474Q9P2X8 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms