Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
THUMPD1Q9NXG2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 AL121829.2-201ENST00000620908 328 ntBASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
THUMPD1Q9NXG2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 PNMA6B-201ENST00000538162 1200 ntBASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.09■□□□□ 0.49
THUMPD1Q9NXG2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 AL161938.1-201ENST00000569833 2180 ntBASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
THUMPD1Q9NXG2 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 OR2A1-AS1-207ENST00000486094 819 ntBASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 AC120498.8-201ENST00000614275 531 ntBASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
THUMPD1Q9NXG2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms