Protein–RNA interactions for Protein: Q9NUW8

TDP1, Tyrosyl-DNA phosphodiesterase 1, humanhuman

Predictions only

Length 608 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1Q9NUW8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TDP1Q9NUW8 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 AL031133.1-201ENST00000406807 723 ntBASIC19.84■□□□□ 0.77
TDP1Q9NUW8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 ZNF815P-204ENST00000434898 1737 ntBASIC19.84■□□□□ 0.77
TDP1Q9NUW8 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TDP1Q9NUW8 KRT8P45-201ENST00000414328 1447 ntBASIC19.84■□□□□ 0.77
TDP1Q9NUW8 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 HOMER2P1-201ENST00000455653 964 ntBASIC19.83■□□□□ 0.77
TDP1Q9NUW8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.83■□□□□ 0.77
TDP1Q9NUW8 AC091076.1-201ENST00000610741 619 ntBASIC19.83■□□□□ 0.77
TDP1Q9NUW8 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TDP1Q9NUW8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 AL023973.1-201ENST00000624619 620 ntBASIC19.82■□□□□ 0.76
TDP1Q9NUW8 AL358472.4-201ENST00000633140 710 ntBASIC19.82■□□□□ 0.76
TDP1Q9NUW8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TDP1Q9NUW8 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AL157384.1-201ENST00000445995 2473 ntBASIC19.81■□□□□ 0.76
TDP1Q9NUW8 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.81■□□□□ 0.76
TDP1Q9NUW8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AL441883.1-201ENST00000566170 1045 ntBASIC19.81■□□□□ 0.76
TDP1Q9NUW8 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms