Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN4Q9NRR5 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
UBQLN4Q9NRR5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.73■□□□□ 0.43
UBQLN4Q9NRR5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 LINC01465-201ENST00000408887 1940 ntBASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 KSR1P1-201ENST00000446298 240 ntBASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 TMEM191A-211ENST00000637163 1067 ntBASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
UBQLN4Q9NRR5 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC17.71■□□□□ 0.43
UBQLN4Q9NRR5 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBQLN4Q9NRR5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
UBQLN4Q9NRR5 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
UBQLN4Q9NRR5 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 AF186192.3-201ENST00000583427 947 ntBASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 AC131212.4-201ENST00000623606 975 ntBASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
UBQLN4Q9NRR5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
UBQLN4Q9NRR5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms