Protein–RNA interactions for Protein: Q9NR80

ARHGEF4, Rho guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4Q9NR80 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 AC093484.2-201ENST00000580996 2166 ntBASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 MIR1238-201ENST00000408483 83 ntBASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ARHGEF4Q9NR80 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 AC116562.2-201ENST00000507042 360 ntBASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 C1QL1P1-201ENST00000568105 661 ntBASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
ARHGEF4Q9NR80 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 TK2-213ENST00000563369 882 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 MIR6786-201ENST00000616843 113 ntBASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 KRT8P9-201ENST00000558927 1449 ntBASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 Z82202.1-201ENST00000623446 1880 ntBASIC20.16■□□□□ 0.82
ARHGEF4Q9NR80 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
ARHGEF4Q9NR80 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms