Protein–RNA interactions for Protein: Q9H741

C12orf49, UPF0454 protein C12orf49, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49Q9H741 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
C12orf49Q9H741 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
C12orf49Q9H741 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.12■□□□□ 0.33
C12orf49Q9H741 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C12orf49Q9H741 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.12■□□□□ 0.33
C12orf49Q9H741 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 AFG3L1P-217ENST00000557444 2447 ntBASIC17.11■□□□□ 0.33
C12orf49Q9H741 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
C12orf49Q9H741 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
C12orf49Q9H741 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 CRYGFP-201ENST00000418459 633 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 AC097488.1-201ENST00000507834 756 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 SLC25A1P4-201ENST00000567977 778 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 KRT8P9-201ENST00000558927 1449 ntBASIC17.1■□□□□ 0.33
C12orf49Q9H741 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.1■□□□□ 0.33
C12orf49Q9H741 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C12orf49Q9H741 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 FAM207BP-201ENST00000447172 505 ntBASIC17.09■□□□□ 0.33
C12orf49Q9H741 Z85996.1-201ENST00000494644 937 ntBASIC17.09■□□□□ 0.33
C12orf49Q9H741 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 LINC01023-201ENST00000606054 436 ntBASIC17.09■□□□□ 0.33
C12orf49Q9H741 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.09■□□□□ 0.33
C12orf49Q9H741 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
C12orf49Q9H741 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms