Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 PCDHA14-201ENST00000506751 2298 ntBASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 CICP13-201ENST00000422015 2789 ntBASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CYSTM1Q9H1C7 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC11.21□□□□□ -0.61
CYSTM1Q9H1C7 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.21□□□□□ -0.62
CYSTM1Q9H1C7 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 MIR219A2-201ENST00000608502 1504 ntBASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 LYSMD4-203ENST00000378904 2122 ntBASIC11.2□□□□□ -0.62
CYSTM1Q9H1C7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC11.2□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms