Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 NPAP1P7-201ENST00000613027 823 ntBASIC25.03■■□□□ 1.6
PCDH11XQ9BZA7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 PALM-208ENST00000592155 2272 ntTSL 4 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 TSPY23P-201ENST00000440136 739 ntBASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 AL691432.3-201ENST00000621860 400 ntBASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
PCDH11XQ9BZA7 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 AL645929.1-201ENST00000420084 975 ntBASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC25.01■■□□□ 1.59
PCDH11XQ9BZA7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 RASA4DP-201ENST00000460726 1199 ntBASIC25■■□□□ 1.59
PCDH11XQ9BZA7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC25■■□□□ 1.59
PCDH11XQ9BZA7 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 AC034232.1-201ENST00000506026 1064 ntBASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
PCDH11XQ9BZA7 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 ZNF815P-204ENST00000434898 1737 ntBASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
PCDH11XQ9BZA7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms