Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NICN1Q9BSH3 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NICN1Q9BSH3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NICN1Q9BSH3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NICN1Q9BSH3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 TFP1-202ENST00000475455 1573 ntBASIC16.53■□□□□ 0.24
NICN1Q9BSH3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 GPX1P1-201ENST00000388829 606 ntBASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 ZNF815P-204ENST00000434898 1737 ntBASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 AC009113.1-201ENST00000570267 2443 ntBASIC16.53■□□□□ 0.24
NICN1Q9BSH3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NICN1Q9BSH3 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NICN1Q9BSH3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
NICN1Q9BSH3 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 AL512625.2-201ENST00000417533 625 ntBASIC16.51■□□□□ 0.23
NICN1Q9BSH3 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
NICN1Q9BSH3 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms