Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.84□□□□□ -0.35
LITAFQ99732 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC12.83□□□□□ -0.35
LITAFQ99732 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.83□□□□□ -0.35
LITAFQ99732 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
LITAFQ99732 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC12.83□□□□□ -0.36
LITAFQ99732 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LITAFQ99732 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
LITAFQ99732 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
LITAFQ99732 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 RPP21-222ENST00000433076 577 ntTSL 2 BASIC12.83□□□□□ -0.36
LITAFQ99732 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC12.83□□□□□ -0.36
LITAFQ99732 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC12.83□□□□□ -0.36
LITAFQ99732 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 AC141586.5-201ENST00000624546 2050 ntBASIC12.83□□□□□ -0.36
LITAFQ99732 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC12.83□□□□□ -0.36
LITAFQ99732 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC12.83□□□□□ -0.36
LITAFQ99732 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
LITAFQ99732 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC12.82□□□□□ -0.36
LITAFQ99732 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.82□□□□□ -0.36
LITAFQ99732 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
LITAFQ99732 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC12.82□□□□□ -0.36
LITAFQ99732 GRAMD4P2-201ENST00000423297 1097 ntBASIC12.82□□□□□ -0.36
LITAFQ99732 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 CCDC92B-201ENST00000575506 885 ntBASIC12.82□□□□□ -0.36
LITAFQ99732 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.82□□□□□ -0.36
LITAFQ99732 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.82□□□□□ -0.36
LITAFQ99732 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 CYP21A1P-202ENST00000354927 1481 ntBASIC12.82□□□□□ -0.36
LITAFQ99732 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.82□□□□□ -0.36
LITAFQ99732 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
LITAFQ99732 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC12.82□□□□□ -0.36
LITAFQ99732 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
LITAFQ99732 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
LITAFQ99732 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.81□□□□□ -0.36
LITAFQ99732 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
LITAFQ99732 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
LITAFQ99732 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms