Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDHB18PQ96TA0 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 AC124016.1-201ENST00000609552 612 ntBASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.44■□□□□ 0.86
PCDHB18PQ96TA0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 AC006058.3-201ENST00000606217 1069 ntBASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDHB18PQ96TA0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 AC239809.2-201ENST00000415381 517 ntBASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 CD99P1-205ENST00000527459 561 ntBASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 AC004264.1-201ENST00000608354 794 ntBASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDHB18PQ96TA0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 AC128676.1-201ENST00000454392 318 ntBASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 AL160286.2-201ENST00000567150 934 ntBASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDHB18PQ96TA0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB18PQ96TA0 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB18PQ96TA0 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB18PQ96TA0 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB18PQ96TA0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDHB18PQ96TA0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms