Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.87■□□□□ 0.77
RPRD1AQ96P16 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 AP000525.1-201ENST00000608286 694 ntBASIC19.86■□□□□ 0.77
RPRD1AQ96P16 AC130371.2-201ENST00000619443 611 ntBASIC19.86■□□□□ 0.77
RPRD1AQ96P16 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 SDHAP1-207ENST00000440850 2000 ntBASIC19.86■□□□□ 0.77
RPRD1AQ96P16 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RPRD1AQ96P16 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.85■□□□□ 0.77
RPRD1AQ96P16 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 AC091390.4-202ENST00000476426 537 ntBASIC19.85■□□□□ 0.77
RPRD1AQ96P16 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 BX088651.1-201ENST00000540551 451 ntBASIC19.85■□□□□ 0.77
RPRD1AQ96P16 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.85■□□□□ 0.77
RPRD1AQ96P16 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 AC008040.2-201ENST00000461049 708 ntBASIC19.84■□□□□ 0.77
RPRD1AQ96P16 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 DGCR10-201ENST00000609839 495 ntBASIC19.84■□□□□ 0.77
RPRD1AQ96P16 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 KRT8P41-201ENST00000533985 1514 ntBASIC19.84■□□□□ 0.77
RPRD1AQ96P16 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 AC079598.2-202ENST00000546624 1451 ntBASIC19.84■□□□□ 0.77
RPRD1AQ96P16 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.84■□□□□ 0.77
RPRD1AQ96P16 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 FAM207BP-201ENST00000447172 505 ntBASIC19.83■□□□□ 0.77
RPRD1AQ96P16 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.83■□□□□ 0.77
RPRD1AQ96P16 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.83■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms