Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
LRRC46Q96FV0 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 AC131212.4-201ENST00000623606 975 ntBASIC17.33■□□□□ 0.36
LRRC46Q96FV0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LRRC46Q96FV0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 LIN28AP1-201ENST00000429574 405 ntBASIC17.32■□□□□ 0.36
LRRC46Q96FV0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 AL137013.1-201ENST00000432946 1228 ntBASIC17.32■□□□□ 0.36
LRRC46Q96FV0 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 C1QL1P1-201ENST00000568105 661 ntBASIC17.32■□□□□ 0.36
LRRC46Q96FV0 DGCR10-201ENST00000609839 495 ntBASIC17.32■□□□□ 0.36
LRRC46Q96FV0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRRC46Q96FV0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AC079598.2-202ENST00000546624 1451 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 BX323043.1-201ENST00000641006 1765 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AC113347.1-201ENST00000413321 391 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AC128688.1-201ENST00000487626 519 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 RN7SL850P-201ENST00000579959 291 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AL445675.2-201ENST00000620291 557 ntBASIC17.31■□□□□ 0.36
LRRC46Q96FV0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRRC46Q96FV0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC46Q96FV0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
LRRC46Q96FV0 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC46Q96FV0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRRC46Q96FV0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms