Protein–RNA interactions for Protein: Q93050

ATP6V0A1, V-type proton ATPase 116 kDa subunit a isoform 1, humanhuman

Predictions only

Length 837 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1Q93050 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 MFAP1P1-201ENST00000442257 1255 ntBASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 AC091390.4-202ENST00000476426 537 ntBASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ATP6V0A1Q93050 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 ZNF815P-204ENST00000434898 1737 ntBASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ATP6V0A1Q93050 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 RNF146-204ENST00000476956 884 ntTSL 2 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 NTF6B-201ENST00000591913 560 ntBASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 FAM87A-204ENST00000613235 858 ntBASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ATP6V0A1Q93050 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 AC006011.2-201ENST00000621313 1158 ntBASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ATP6V0A1Q93050 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 AC096733.2-201ENST00000609937 1394 ntBASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 AC104417.2-201ENST00000562989 1793 ntBASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 KRT8P41-201ENST00000533985 1514 ntBASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ATP6V0A1Q93050 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.54■■□□□ 1.04
ATP6V0A1Q93050 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms