Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SCG3Q8WXD2 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 Z99916.2-201ENST00000604037 246 ntBASIC19.7■□□□□ 0.74
SCG3Q8WXD2 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.7■□□□□ 0.74
SCG3Q8WXD2 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 AC005082.1-201ENST00000413042 2259 ntBASIC19.69■□□□□ 0.74
SCG3Q8WXD2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 KRASP1-201ENST00000407852 552 ntBASIC19.69■□□□□ 0.74
SCG3Q8WXD2 AC012618.2-201ENST00000428058 849 ntBASIC19.69■□□□□ 0.74
SCG3Q8WXD2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SCG3Q8WXD2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 TREX1-205ENST00000625293 1783 ntBASIC19.68■□□□□ 0.74
SCG3Q8WXD2 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 AC116351.2-201ENST00000606540 1585 ntBASIC19.68■□□□□ 0.74
SCG3Q8WXD2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SCG3Q8WXD2 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SCG3Q8WXD2 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms