Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 CD276-203ENST00000537340 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 AC116351.2-201ENST00000606540 1585 ntBASIC19.15■□□□□ 0.66
CKAP2Q8WWK9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CKAP2Q8WWK9 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CKAP2Q8WWK9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CKAP2Q8WWK9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
CKAP2Q8WWK9 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 UQCRFS1P1-201ENST00000435169 820 ntBASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 GCK-205ENST00000437084 1385 ntTSL 5 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CKAP2Q8WWK9 SDHAP1-207ENST00000440850 2000 ntBASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.13■□□□□ 0.65
CKAP2Q8WWK9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CKAP2Q8WWK9 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 AC104417.2-201ENST00000562989 1793 ntBASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CKAP2Q8WWK9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CKAP2Q8WWK9 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms