Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CHD5Q8TDI0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.71
CHD5Q8TDI0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.51■□□□□ 0.71
CHD5Q8TDI0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.51■□□□□ 0.71
CHD5Q8TDI0 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 AC010947.1-201ENST00000623454 693 ntBASIC19.51■□□□□ 0.71
CHD5Q8TDI0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.51■□□□□ 0.71
CHD5Q8TDI0 AC007952.6-201ENST00000573168 2673 ntBASIC19.51■□□□□ 0.71
CHD5Q8TDI0 AC003957.1-201ENST00000625108 2673 ntBASIC19.51■□□□□ 0.71
CHD5Q8TDI0 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 CKBP1-201ENST00000565489 1086 ntBASIC19.5■□□□□ 0.71
CHD5Q8TDI0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CHD5Q8TDI0 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 FP475955.4-201ENST00000623131 1990 ntBASIC19.49■□□□□ 0.71
CHD5Q8TDI0 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AC116562.4-201ENST00000641316 2276 ntBASIC19.49■□□□□ 0.71
CHD5Q8TDI0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 LINC01023-201ENST00000606054 436 ntBASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.49■□□□□ 0.71
CHD5Q8TDI0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 AC007663.1-201ENST00000438948 1240 ntBASIC19.48■□□□□ 0.71
CHD5Q8TDI0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.48■□□□□ 0.71
CHD5Q8TDI0 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.48■□□□□ 0.71
CHD5Q8TDI0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms