Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 AC027612.3-201ENST00000413684 1047 ntBASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 TERF1P2-201ENST00000583350 1212 ntBASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.61■□□□□ 0.41
CNIH3Q8TBE1 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AC004854.2-201ENST00000608450 1441 ntBASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CNIH3Q8TBE1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 ZNF815P-204ENST00000434898 1737 ntBASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 AL591742.1-201ENST00000604433 565 ntBASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CNIH3Q8TBE1 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 IRX1P1-201ENST00000438849 1838 ntBASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
CNIH3Q8TBE1 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms