Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LMO3Q8TAP4 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 AC006333.2-201ENST00000607957 2099 ntBASIC20.67■□□□□ 0.9
LMO3Q8TAP4 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 TSPY23P-201ENST00000440136 739 ntBASIC20.67■□□□□ 0.9
LMO3Q8TAP4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LMO3Q8TAP4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 RARRES2P10-201ENST00000564312 460 ntBASIC20.66■□□□□ 0.9
LMO3Q8TAP4 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 ABBA01031674.1-201ENST00000635145 728 ntBASIC20.66■□□□□ 0.9
LMO3Q8TAP4 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.66■□□□□ 0.9
LMO3Q8TAP4 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 AC093503.3-201ENST00000624917 2352 ntBASIC20.66■□□□□ 0.9
LMO3Q8TAP4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
LMO3Q8TAP4 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 CROCCP3-202ENST00000420820 1947 ntBASIC20.65■□□□□ 0.9
LMO3Q8TAP4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.65■□□□□ 0.9
LMO3Q8TAP4 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.65■□□□□ 0.9
LMO3Q8TAP4 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 GCSHP5-201ENST00000443090 522 ntBASIC20.65■□□□□ 0.9
LMO3Q8TAP4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 AC004408.2-201ENST00000623613 2777 ntBASIC20.65■□□□□ 0.9
LMO3Q8TAP4 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LMO3Q8TAP4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.64■□□□□ 0.9
LMO3Q8TAP4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LMO3Q8TAP4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LMO3Q8TAP4 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LMO3Q8TAP4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 TSPY21P-201ENST00000433481 731 ntBASIC20.64■□□□□ 0.89
LMO3Q8TAP4 KSR1P1-201ENST00000446298 240 ntBASIC20.64■□□□□ 0.89
LMO3Q8TAP4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.64■□□□□ 0.89
LMO3Q8TAP4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms