Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL160286.2-201ENST00000567150 934 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AC092329.2-201ENST00000598402 547 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AC006538.3-201ENST00000612495 578 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 AC023511.2-201ENST00000618803 211 ntBASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
SNIP1Q8TAD8 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 KRT8P8-201ENST00000434750 1448 ntBASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 TMEM179-206ENST00000616017 1645 ntBASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 GCSHP2-201ENST00000560971 527 ntBASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.17■□□□□ 0.5
SNIP1Q8TAD8 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 SPDYE15P-201ENST00000424157 909 ntBASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 SPDYE13P-201ENST00000445314 798 ntBASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.16■□□□□ 0.5
SNIP1Q8TAD8 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.15■□□□□ 0.5
SNIP1Q8TAD8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
SNIP1Q8TAD8 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 AL645929.1-201ENST00000420084 975 ntBASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SNIP1Q8TAD8 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms