Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LSMEM1Q8N8F7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 AC026366.1-201ENST00000488803 879 ntBASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.63■□□□□ 0.41
LSMEM1Q8N8F7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 AL161938.1-201ENST00000569833 2180 ntBASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 KRT17P3-201ENST00000420566 1262 ntBASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC17.62■□□□□ 0.41
LSMEM1Q8N8F7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 RNA5SP413-201ENST00000516373 109 ntBASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 NBPF21P-201ENST00000425093 1451 ntBASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LSMEM1Q8N8F7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms