Protein–RNA interactions for Protein: Q8N6L0

CCDC155, Protein KASH5, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC155Q8N6L0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.82■■□□□ 1.08
CCDC155Q8N6L0 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 LIN28AP1-201ENST00000429574 405 ntBASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 PPP1R14BP5-201ENST00000440334 435 ntBASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CCDC155Q8N6L0 AC073508.3-201ENST00000619697 1419 ntBASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 AP005242.2-201ENST00000580065 1175 ntBASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CCDC155Q8N6L0 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 YBX1P10-201ENST00000444752 975 ntBASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 ATP5G1P1-201ENST00000448724 379 ntBASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CCDC155Q8N6L0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 DUX4L26-201ENST00000489078 1255 ntBASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
CCDC155Q8N6L0 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 EGLN1P1-201ENST00000531623 762 ntBASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 AC131212.4-201ENST00000623606 975 ntBASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 KRT16P6-202ENST00000425692 1426 ntBASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CCDC155Q8N6L0 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms