Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AL359075.1-203ENST00000462729 1002 ntBASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AL136038.3-201ENST00000561909 1096 ntBASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 NEK4P2-201ENST00000580004 1012 ntBASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AL023973.1-201ENST00000624619 620 ntBASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 AC073314.1-201ENST00000568729 2216 ntBASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SYNPOQ8N3V7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 BX119927.1-201ENST00000636596 1552 ntBASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 AC005332.1-201ENST00000577698 1310 ntBASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SYNPOQ8N3V7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.58■□□□□ 0.72
SYNPOQ8N3V7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SYNPOQ8N3V7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SYNPOQ8N3V7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC19.56■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms