Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LYSMD2Q8IV50 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 TPRG1LP1-201ENST00000598702 760 ntBASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 AC135279.3-201ENST00000610945 1311 ntBASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LYSMD2Q8IV50 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 AC012414.1-201ENST00000556676 535 ntBASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 AC138907.5-202ENST00000569484 235 ntBASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 AC080080.1-201ENST00000625121 2420 ntBASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.9■□□□□ 0.3
LYSMD2Q8IV50 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
LYSMD2Q8IV50 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 AC011270.2-201ENST00000624293 2550 ntBASIC16.89■□□□□ 0.29
LYSMD2Q8IV50 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms