Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC149Q6ZUS6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 GABARAPL3-202ENST00000624044 1851 ntBASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AP003041.3-201ENST00000527151 707 ntBASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AL023973.1-201ENST00000624619 620 ntBASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC149Q6ZUS6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC149Q6ZUS6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 DUSP5P1-201ENST00000441325 1139 ntBASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 HCG4P8-203ENST00000443049 980 ntBASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 AL441883.1-201ENST00000566170 1045 ntBASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 AC008622.2-201ENST00000617006 1229 ntBASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC149Q6ZUS6 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 KRT8P11-201ENST00000409686 1436 ntBASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 AL450487.1-201ENST00000426799 995 ntBASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 AC005332.1-201ENST00000577698 1310 ntBASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC149Q6ZUS6 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms