Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 AP000974.1-201ENST00000623909 2387 ntBASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TTC39BQ5VTQ0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 AC026271.3-201ENST00000571884 352 ntBASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TTC39BQ5VTQ0 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 FAM197Y1-201ENST00000421178 764 ntBASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 TSPY7P-201ENST00000431358 1114 ntBASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TTC39BQ5VTQ0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 AC026471.5-201ENST00000615068 467 ntBASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TTC39BQ5VTQ0 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TTC39BQ5VTQ0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms