Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 PON3-203ENST00000427422 894 ntTSL 3 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 GOLGA6L3-201ENST00000507199 1679 ntBASIC10.58□□□□□ -0.72
UBR4Q5T4S7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CCS-201ENST00000310190 942 ntTSL 5 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBR4Q5T4S7 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AC116407.2-201ENST00000613639 860 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 NSUN5P1-202ENST00000421140 1535 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 NSUN5P2-203ENST00000457352 1529 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 LINC01465-201ENST00000408887 1940 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AC009102.3-201ENST00000623118 1491 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 AC079602.3-201ENST00000623931 403 ntBASIC10.57□□□□□ -0.72
UBR4Q5T4S7 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UBR4Q5T4S7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC023274.1-201ENST00000418278 595 ntBASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 OARD1-208ENST00000469104 704 ntTSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 MIR5100-201ENST00000579544 119 ntBASIC10.56□□□□□ -0.72
UBR4Q5T4S7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC040169.1-201ENST00000565382 521 ntBASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC092068.2-201ENST00000590491 1708 ntBASIC10.56□□□□□ -0.72
UBR4Q5T4S7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
UBR4Q5T4S7 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 BAALC-202ENST00000306391 243 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 BAALC-204ENST00000330955 222 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 ELK2AP-201ENST00000392510 1007 ntBASIC10.55□□□□□ -0.72
UBR4Q5T4S7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
UBR4Q5T4S7 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC10.55□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms