Protein–RNA interactions for Protein: Q504U0

C4orf46, Renal cancer differentiation gene 1 protein, humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf46Q504U0 KRT8P17-201ENST00000453110 1448 ntBASIC16.35■□□□□ 0.21
C4orf46Q504U0 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
C4orf46Q504U0 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
C4orf46Q504U0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC16.34■□□□□ 0.21
C4orf46Q504U0 FER1L4-210ENST00000615531 5998 ntBASIC16.34■□□□□ 0.21
C4orf46Q504U0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
C4orf46Q504U0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
C4orf46Q504U0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C4orf46Q504U0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
C4orf46Q504U0 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.33■□□□□ 0.21
C4orf46Q504U0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
C4orf46Q504U0 AC141586.3-201ENST00000562166 1838 ntBASIC16.33■□□□□ 0.21
C4orf46Q504U0 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.21
C4orf46Q504U0 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 GRAMD4P2-201ENST00000423297 1097 ntBASIC16.33■□□□□ 0.2
C4orf46Q504U0 AC105265.2-201ENST00000467189 838 ntBASIC16.33■□□□□ 0.2
C4orf46Q504U0 AC079140.4-201ENST00000507448 529 ntBASIC16.33■□□□□ 0.2
C4orf46Q504U0 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.33■□□□□ 0.2
C4orf46Q504U0 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.33■□□□□ 0.2
C4orf46Q504U0 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
C4orf46Q504U0 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 AC091799.1-201ENST00000422823 811 ntBASIC16.32■□□□□ 0.2
C4orf46Q504U0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 AL356652.1-201ENST00000615962 565 ntBASIC16.32■□□□□ 0.2
C4orf46Q504U0 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
C4orf46Q504U0 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
C4orf46Q504U0 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
C4orf46Q504U0 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
C4orf46Q504U0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms