Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 GOLGA6L3-201ENST00000507199 1679 ntBASIC21.9■■□□□ 1.1
LONRF3Q496Y0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 AL049812.1-201ENST00000432563 2267 ntBASIC21.9■■□□□ 1.1
LONRF3Q496Y0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.9■■□□□ 1.1
LONRF3Q496Y0 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LONRF3Q496Y0 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
LONRF3Q496Y0 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.89■■□□□ 1.1
LONRF3Q496Y0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.89■■□□□ 1.1
LONRF3Q496Y0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LONRF3Q496Y0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC21.89■■□□□ 1.09
LONRF3Q496Y0 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 AL161938.1-201ENST00000569833 2180 ntBASIC21.88■■□□□ 1.09
LONRF3Q496Y0 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LONRF3Q496Y0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 MIR4497-201ENST00000583208 89 ntBASIC21.87■■□□□ 1.09
LONRF3Q496Y0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LONRF3Q496Y0 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
LONRF3Q496Y0 AP006587.1-201ENST00000534129 1502 ntBASIC21.85■■□□□ 1.09
LONRF3Q496Y0 AC141586.3-201ENST00000562166 1838 ntBASIC21.85■■□□□ 1.09
LONRF3Q496Y0 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms