Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 AC064862.7-201ENST00000604520 867 ntBASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 AL691403.2-201ENST00000618460 490 ntBASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
RSPO4Q2I0M5 AL162741.1-201ENST00000565563 1558 ntBASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 AC138894.3-201ENST00000603787 634 ntBASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 AC093525.10-201ENST00000625130 1569 ntBASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
RSPO4Q2I0M5 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 TSPY22P-201ENST00000427496 604 ntBASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 COX10-202ENST00000429152 875 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 TERC-201ENST00000602385 541 ntBASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO4Q2I0M5 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 MIR564-202ENST00000385049 94 ntBASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 FABP5-202ENST00000396359 986 ntTSL 5 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 PMS2P2-201ENST00000425039 1128 ntBASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 AC104819.1-201ENST00000504587 486 ntBASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 AC027796.2-201ENST00000575326 344 ntBASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO4Q2I0M5 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 MIR940-201ENST00000401276 94 ntBASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.65■□□□□ 0.58
RSPO4Q2I0M5 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms