Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 GCK-205ENST00000437084 1385 ntTSL 5 BASIC15.89■□□□□ 0.13
SRPXP78539 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
SRPXP78539 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 BMP1-204ENST00000397814 836 ntTSL 4 BASIC15.89■□□□□ 0.13
SRPXP78539 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 RARRES2P4-201ENST00000514074 484 ntBASIC15.89■□□□□ 0.13
SRPXP78539 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.89■□□□□ 0.13
SRPXP78539 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SRPXP78539 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
SRPXP78539 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 AC116351.2-201ENST00000606540 1585 ntBASIC15.88■□□□□ 0.13
SRPXP78539 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 BICD1-207ENST00000551848 1962 ntBASIC15.88■□□□□ 0.13
SRPXP78539 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 BRI3-207ENST00000539286 699 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC15.88■□□□□ 0.13
SRPXP78539 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 RALB-208ENST00000631312 311 ntTSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 IRX1P1-201ENST00000438849 1838 ntBASIC15.88■□□□□ 0.13
SRPXP78539 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.88■□□□□ 0.13
SRPXP78539 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
SRPXP78539 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC15.88■□□□□ 0.13
SRPXP78539 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
SRPXP78539 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
SRPXP78539 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.87■□□□□ 0.13
SRPXP78539 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
SRPXP78539 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
SRPXP78539 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.86■□□□□ 0.13
SRPXP78539 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.86■□□□□ 0.13
SRPXP78539 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRPXP78539 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.86■□□□□ 0.13
SRPXP78539 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
SRPXP78539 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
SRPXP78539 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms