Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
USP46P62068 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
USP46P62068 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
USP46P62068 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
USP46P62068 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.26■□□□□ 0.83
USP46P62068 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
USP46P62068 INGX-201ENST00000359239 846 ntBASIC20.26■□□□□ 0.83
USP46P62068 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.26■□□□□ 0.83
USP46P62068 MFAP1P1-201ENST00000442257 1255 ntBASIC20.26■□□□□ 0.83
USP46P62068 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC20.26■□□□□ 0.83
USP46P62068 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.26■□□□□ 0.83
USP46P62068 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 AC125437.2-201ENST00000625180 2167 ntBASIC20.26■□□□□ 0.83
USP46P62068 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
USP46P62068 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.26■□□□□ 0.83
USP46P62068 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.26■□□□□ 0.83
USP46P62068 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
USP46P62068 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.25■□□□□ 0.83
USP46P62068 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC20.25■□□□□ 0.83
USP46P62068 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 AC096733.2-201ENST00000609937 1394 ntBASIC20.25■□□□□ 0.83
USP46P62068 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.25■□□□□ 0.83
USP46P62068 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.25■□□□□ 0.83
USP46P62068 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.25■□□□□ 0.83
USP46P62068 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.25■□□□□ 0.83
USP46P62068 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC20.25■□□□□ 0.83
USP46P62068 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.25■□□□□ 0.83
USP46P62068 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.25■□□□□ 0.83
USP46P62068 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
USP46P62068 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.25■□□□□ 0.83
USP46P62068 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
USP46P62068 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
USP46P62068 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 AC104417.2-201ENST00000562989 1793 ntBASIC20.24■□□□□ 0.83
USP46P62068 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
USP46P62068 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.24■□□□□ 0.83
USP46P62068 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
USP46P62068 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.24■□□□□ 0.83
USP46P62068 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.24■□□□□ 0.83
USP46P62068 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.24■□□□□ 0.83
USP46P62068 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.24■□□□□ 0.83
USP46P62068 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
USP46P62068 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.24■□□□□ 0.83
USP46P62068 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
USP46P62068 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.23■□□□□ 0.83
USP46P62068 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP46P62068 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP46P62068 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP46P62068 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
USP46P62068 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC20.23■□□□□ 0.83
USP46P62068 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.23■□□□□ 0.83
USP46P62068 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.23■□□□□ 0.83
USP46P62068 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
USP46P62068 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
USP46P62068 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms