Protein–RNA interactions for Protein: P59942

MCCD1, Mitochondrial coiled-coil domain protein 1, humanhuman

Predicted RBP Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MCCD1P59942 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.7■□□□□ 0.9
MCCD1P59942 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.7■□□□□ 0.9
MCCD1P59942 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
MCCD1P59942 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.7■□□□□ 0.9
MCCD1P59942 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
MCCD1P59942 CD177P1-201ENST00000606252 935 ntBASIC20.7■□□□□ 0.9
MCCD1P59942 AL049637.2-201ENST00000641778 930 ntBASIC20.7■□□□□ 0.9
MCCD1P59942 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MCCD1P59942 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MCCD1P59942 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
MCCD1P59942 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MCCD1P59942 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.7■□□□□ 0.9
MCCD1P59942 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
MCCD1P59942 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 AL049812.1-201ENST00000432563 2267 ntBASIC20.69■□□□□ 0.9
MCCD1P59942 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
MCCD1P59942 AL158047.1-201ENST00000445918 881 ntBASIC20.69■□□□□ 0.9
MCCD1P59942 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC20.69■□□□□ 0.9
MCCD1P59942 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 AP000692.2-201ENST00000608391 879 ntBASIC20.69■□□□□ 0.9
MCCD1P59942 MIR6786-201ENST00000616843 113 ntBASIC20.69■□□□□ 0.9
MCCD1P59942 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.69■□□□□ 0.9
MCCD1P59942 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.69■□□□□ 0.9
MCCD1P59942 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MCCD1P59942 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.69■□□□□ 0.9
MCCD1P59942 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.69■□□□□ 0.9
MCCD1P59942 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC20.68■□□□□ 0.9
MCCD1P59942 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MCCD1P59942 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.68■□□□□ 0.9
MCCD1P59942 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.68■□□□□ 0.9
MCCD1P59942 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 NUDT16P1-203ENST00000513809 620 ntBASIC20.68■□□□□ 0.9
MCCD1P59942 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MCCD1P59942 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.68■□□□□ 0.9
MCCD1P59942 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.68■□□□□ 0.9
MCCD1P59942 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.68■□□□□ 0.9
MCCD1P59942 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.68■□□□□ 0.9
MCCD1P59942 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.68■□□□□ 0.9
MCCD1P59942 AP001412.1-201ENST00000608405 714 ntBASIC20.68■□□□□ 0.9
MCCD1P59942 AC098818.2-201ENST00000564925 2320 ntBASIC20.68■□□□□ 0.9
MCCD1P59942 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
MCCD1P59942 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
MCCD1P59942 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
MCCD1P59942 FSCN1P1-201ENST00000568912 1481 ntBASIC20.68■□□□□ 0.9
MCCD1P59942 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
MCCD1P59942 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.67■□□□□ 0.9
MCCD1P59942 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.67■□□□□ 0.9
MCCD1P59942 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 CROCCP3-202ENST00000420820 1947 ntBASIC20.67■□□□□ 0.9
MCCD1P59942 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
MCCD1P59942 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 CKBP1-201ENST00000565489 1086 ntBASIC20.67■□□□□ 0.9
MCCD1P59942 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.67■□□□□ 0.9
MCCD1P59942 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
MCCD1P59942 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 AC093525.10-201ENST00000625130 1569 ntBASIC20.67■□□□□ 0.9
MCCD1P59942 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
MCCD1P59942 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MCCD1P59942 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 AP000974.1-201ENST00000623909 2387 ntBASIC20.66■□□□□ 0.9
MCCD1P59942 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.66■□□□□ 0.9
MCCD1P59942 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
MCCD1P59942 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms