Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3BGRP55822 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SH3BGRP55822 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3BGRP55822 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3BGRP55822 AL354751.1-201ENST00000412768 1863 ntBASIC18.35■□□□□ 0.53
SH3BGRP55822 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
SH3BGRP55822 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.35■□□□□ 0.53
SH3BGRP55822 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SH3BGRP55822 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3BGRP55822 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SH3BGRP55822 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SH3BGRP55822 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3BGRP55822 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SH3BGRP55822 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SH3BGRP55822 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3BGRP55822 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.34■□□□□ 0.53
SH3BGRP55822 MFSD11-216ENST00000590393 1141 ntBASIC18.34■□□□□ 0.53
SH3BGRP55822 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 IKBKGP1-201ENST00000612193 1073 ntBASIC18.34■□□□□ 0.53
SH3BGRP55822 AC010536.3-201ENST00000620306 533 ntBASIC18.34■□□□□ 0.53
SH3BGRP55822 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 SIRPAP1-201ENST00000448467 1770 ntBASIC18.34■□□□□ 0.53
SH3BGRP55822 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SH3BGRP55822 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
SH3BGRP55822 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3BGRP55822 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC18.34■□□□□ 0.53
SH3BGRP55822 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SH3BGRP55822 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3BGRP55822 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.33■□□□□ 0.53
SH3BGRP55822 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SH3BGRP55822 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.33■□□□□ 0.52
SH3BGRP55822 AC011767.1-201ENST00000617410 1153 ntBASIC18.33■□□□□ 0.52
SH3BGRP55822 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.33■□□□□ 0.52
SH3BGRP55822 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SH3BGRP55822 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.33■□□□□ 0.52
SH3BGRP55822 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 AC104581.1-202ENST00000635932 2618 ntBASIC18.33■□□□□ 0.52
SH3BGRP55822 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SH3BGRP55822 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3BGRP55822 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 BICD1-207ENST00000551848 1962 ntBASIC18.32■□□□□ 0.52
SH3BGRP55822 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3BGRP55822 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.32■□□□□ 0.52
SH3BGRP55822 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SH3BGRP55822 AC013268.1-206ENST00000638368 961 ntBASIC18.32■□□□□ 0.52
SH3BGRP55822 AC112229.1-201ENST00000639295 961 ntBASIC18.32■□□□□ 0.52
SH3BGRP55822 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SH3BGRP55822 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
SH3BGRP55822 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3BGRP55822 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.32■□□□□ 0.52
SH3BGRP55822 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3BGRP55822 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SH3BGRP55822 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.32■□□□□ 0.52
SH3BGRP55822 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3BGRP55822 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
SH3BGRP55822 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.31■□□□□ 0.52
SH3BGRP55822 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3BGRP55822 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SH3BGRP55822 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms