Protein–RNA interactions for Protein: P54253

ATXN1, Ataxin-1, humanhuman

Known RBP Predictions only

Length 815 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1P54253 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.24■□□□□ 0.83
ATXN1P54253 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.24■□□□□ 0.83
ATXN1P54253 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.24■□□□□ 0.83
ATXN1P54253 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.24■□□□□ 0.83
ATXN1P54253 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
ATXN1P54253 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ATXN1P54253 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN1P54253 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN1P54253 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ATXN1P54253 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN1P54253 AL121894.2-201ENST00000602977 491 ntBASIC20.23■□□□□ 0.83
ATXN1P54253 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.23■□□□□ 0.83
ATXN1P54253 CABP2-204ENST00000636477 941 ntTSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 HTR7P1-201ENST00000538670 1336 ntBASIC20.23■□□□□ 0.83
ATXN1P54253 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ATXN1P54253 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN1P54253 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.22■□□□□ 0.83
ATXN1P54253 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATXN1P54253 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC20.22■□□□□ 0.83
ATXN1P54253 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.22■□□□□ 0.83
ATXN1P54253 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
ATXN1P54253 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATXN1P54253 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATXN1P54253 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ATXN1P54253 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATXN1P54253 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN1P54253 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN1P54253 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATXN1P54253 KRT18P57-201ENST00000443599 1254 ntBASIC20.21■□□□□ 0.83
ATXN1P54253 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN1P54253 AC087388.1-201ENST00000571370 1112 ntBASIC20.21■□□□□ 0.83
ATXN1P54253 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATXN1P54253 HLA-A-209ENST00000638375 975 ntBASIC20.21■□□□□ 0.83
ATXN1P54253 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.21■□□□□ 0.83
ATXN1P54253 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.21■□□□□ 0.83
ATXN1P54253 ZNF815P-204ENST00000434898 1737 ntBASIC20.21■□□□□ 0.83
ATXN1P54253 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.21■□□□□ 0.83
ATXN1P54253 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ATXN1P54253 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATXN1P54253 SDHAP1-207ENST00000440850 2000 ntBASIC20.2■□□□□ 0.83
ATXN1P54253 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 AL355355.2-201ENST00000442321 338 ntBASIC20.2■□□□□ 0.82
ATXN1P54253 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.2■□□□□ 0.82
ATXN1P54253 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.2■□□□□ 0.82
ATXN1P54253 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 AC104417.2-201ENST00000562989 1793 ntBASIC20.2■□□□□ 0.82
ATXN1P54253 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.2■□□□□ 0.82
ATXN1P54253 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ATXN1P54253 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATXN1P54253 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.2■□□□□ 0.82
ATXN1P54253 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms