Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
COPAP53621 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
COPAP53621 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
COPAP53621 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
COPAP53621 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.86■□□□□ 0.77
COPAP53621 MIR1238-201ENST00000408483 83 ntBASIC19.86■□□□□ 0.77
COPAP53621 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 YBX1P10-201ENST00000444752 975 ntBASIC19.86■□□□□ 0.77
COPAP53621 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC19.86■□□□□ 0.77
COPAP53621 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
COPAP53621 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
COPAP53621 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.85■□□□□ 0.77
COPAP53621 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.85■□□□□ 0.77
COPAP53621 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
COPAP53621 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 AL390955.1-201ENST00000428694 934 ntBASIC19.85■□□□□ 0.77
COPAP53621 KRT18P16-201ENST00000510337 1294 ntBASIC19.85■□□□□ 0.77
COPAP53621 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.85■□□□□ 0.77
COPAP53621 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.85■□□□□ 0.77
COPAP53621 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.85■□□□□ 0.77
COPAP53621 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
COPAP53621 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.85■□□□□ 0.77
COPAP53621 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.85■□□□□ 0.77
COPAP53621 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
COPAP53621 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.84■□□□□ 0.77
COPAP53621 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 PHGDH-210ENST00000641115 1638 ntBASIC19.84■□□□□ 0.77
COPAP53621 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
COPAP53621 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
COPAP53621 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.84■□□□□ 0.77
COPAP53621 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.84■□□□□ 0.77
COPAP53621 MESTP1-201ENST00000404287 994 ntBASIC19.84■□□□□ 0.77
COPAP53621 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.84■□□□□ 0.77
COPAP53621 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.84■□□□□ 0.77
COPAP53621 FITM1-202ENST00000559294 800 ntBASIC19.84■□□□□ 0.77
COPAP53621 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.84■□□□□ 0.77
COPAP53621 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.84■□□□□ 0.77
COPAP53621 AL445675.2-201ENST00000620291 557 ntBASIC19.84■□□□□ 0.77
COPAP53621 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.84■□□□□ 0.77
COPAP53621 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.84■□□□□ 0.77
COPAP53621 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
COPAP53621 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COPAP53621 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.83■□□□□ 0.77
COPAP53621 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
COPAP53621 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
COPAP53621 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPAP53621 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.83■□□□□ 0.77
COPAP53621 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPAP53621 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
COPAP53621 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC19.83■□□□□ 0.77
COPAP53621 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
COPAP53621 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.83■□□□□ 0.77
COPAP53621 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.83■□□□□ 0.77
COPAP53621 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.83■□□□□ 0.77
COPAP53621 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
COPAP53621 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
COPAP53621 AL031985.4-201ENST00000642138 673 ntBASIC19.83■□□□□ 0.77
COPAP53621 CYP2D8P-201ENST00000433633 1490 ntBASIC19.83■□□□□ 0.76
COPAP53621 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.83■□□□□ 0.76
COPAP53621 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.83■□□□□ 0.76
COPAP53621 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
COPAP53621 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.83■□□□□ 0.76
COPAP53621 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms