Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.29■□□□□ 0.84
TUBP50607 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TUBP50607 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBP50607 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TUBP50607 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
TUBP50607 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBP50607 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 AC133561.5-201ENST00000635547 218 ntBASIC20.28■□□□□ 0.84
TUBP50607 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TUBP50607 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TUBP50607 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.28■□□□□ 0.84
TUBP50607 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.28■□□□□ 0.84
TUBP50607 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TUBP50607 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.27■□□□□ 0.84
TUBP50607 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
TUBP50607 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.27■□□□□ 0.84
TUBP50607 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.27■□□□□ 0.84
TUBP50607 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TUBP50607 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.27■□□□□ 0.84
TUBP50607 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TUBP50607 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.83
TUBP50607 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.83
TUBP50607 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.27■□□□□ 0.83
TUBP50607 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
TUBP50607 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TUBP50607 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TUBP50607 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBP50607 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBP50607 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
TUBP50607 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBP50607 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TUBP50607 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBP50607 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBP50607 AC011506.1-201ENST00000474329 610 ntBASIC20.26■□□□□ 0.83
TUBP50607 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.26■□□□□ 0.83
TUBP50607 AP005242.2-201ENST00000580065 1175 ntBASIC20.26■□□□□ 0.83
TUBP50607 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.26■□□□□ 0.83
TUBP50607 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.26■□□□□ 0.83
TUBP50607 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.26■□□□□ 0.83
TUBP50607 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.26■□□□□ 0.83
TUBP50607 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.26■□□□□ 0.83
TUBP50607 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.26■□□□□ 0.83
TUBP50607 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TUBP50607 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 RCC2P6-201ENST00000526625 1557 ntBASIC20.25■□□□□ 0.83
TUBP50607 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBP50607 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TUBP50607 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBP50607 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TUBP50607 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBP50607 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.25■□□□□ 0.83
TUBP50607 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TUBP50607 MIR1238-201ENST00000408483 83 ntBASIC20.25■□□□□ 0.83
TUBP50607 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC20.25■□□□□ 0.83
TUBP50607 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.25■□□□□ 0.83
TUBP50607 AC130371.2-201ENST00000619443 611 ntBASIC20.25■□□□□ 0.83
TUBP50607 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.25■□□□□ 0.83
TUBP50607 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms