Protein–RNA interactions for Protein: P49768

PSEN1, Presenilin-1, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1P49768 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PSEN1P49768 AC005332.8-201ENST00000622750 2735 ntBASIC20.42■□□□□ 0.86
PSEN1P49768 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PSEN1P49768 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.42■□□□□ 0.86
PSEN1P49768 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 AL355355.2-201ENST00000442321 338 ntBASIC20.42■□□□□ 0.86
PSEN1P49768 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.42■□□□□ 0.86
PSEN1P49768 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.42■□□□□ 0.86
PSEN1P49768 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.42■□□□□ 0.86
PSEN1P49768 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 AC026471.5-201ENST00000615068 467 ntBASIC20.42■□□□□ 0.86
PSEN1P49768 AC005786.4-201ENST00000623369 682 ntBASIC20.42■□□□□ 0.86
PSEN1P49768 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.42■□□□□ 0.86
PSEN1P49768 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.42■□□□□ 0.86
PSEN1P49768 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PSEN1P49768 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.41■□□□□ 0.86
PSEN1P49768 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PSEN1P49768 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.41■□□□□ 0.86
PSEN1P49768 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.41■□□□□ 0.86
PSEN1P49768 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
PSEN1P49768 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC20.41■□□□□ 0.86
PSEN1P49768 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.41■□□□□ 0.86
PSEN1P49768 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.41■□□□□ 0.86
PSEN1P49768 AL032819.2-201ENST00000624543 2162 ntBASIC20.41■□□□□ 0.86
PSEN1P49768 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.41■□□□□ 0.86
PSEN1P49768 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.41■□□□□ 0.86
PSEN1P49768 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PSEN1P49768 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.4■□□□□ 0.86
PSEN1P49768 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.4■□□□□ 0.86
PSEN1P49768 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.4■□□□□ 0.86
PSEN1P49768 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.4■□□□□ 0.86
PSEN1P49768 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
PSEN1P49768 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 NUDT16P1-203ENST00000513809 620 ntBASIC20.4■□□□□ 0.86
PSEN1P49768 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC20.4■□□□□ 0.86
PSEN1P49768 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.4■□□□□ 0.86
PSEN1P49768 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PSEN1P49768 AC026271.3-201ENST00000571884 352 ntBASIC20.4■□□□□ 0.86
PSEN1P49768 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.4■□□□□ 0.86
PSEN1P49768 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 CR392000.1-201ENST00000624770 1228 ntBASIC20.4■□□□□ 0.86
PSEN1P49768 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC20.4■□□□□ 0.86
PSEN1P49768 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 AL031985.4-201ENST00000642138 673 ntBASIC20.4■□□□□ 0.86
PSEN1P49768 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.4■□□□□ 0.86
PSEN1P49768 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PSEN1P49768 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PSEN1P49768 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PSEN1P49768 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PSEN1P49768 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PSEN1P49768 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.39■□□□□ 0.85
PSEN1P49768 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC20.39■□□□□ 0.85
PSEN1P49768 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.39■□□□□ 0.85
PSEN1P49768 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.39■□□□□ 0.85
PSEN1P49768 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.39■□□□□ 0.85
PSEN1P49768 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.39■□□□□ 0.85
PSEN1P49768 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC20.39■□□□□ 0.85
PSEN1P49768 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.39■□□□□ 0.85
PSEN1P49768 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PSEN1P49768 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PSEN1P49768 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
PSEN1P49768 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC20.39■□□□□ 0.85
PSEN1P49768 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PSEN1P49768 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.38■□□□□ 0.85
PSEN1P49768 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms