Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.3■□□□□ 0.52
GABRA4P48169 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.3■□□□□ 0.52
GABRA4P48169 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRA4P48169 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
GABRA4P48169 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRA4P48169 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.3■□□□□ 0.52
GABRA4P48169 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.3■□□□□ 0.52
GABRA4P48169 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.3■□□□□ 0.52
GABRA4P48169 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.3■□□□□ 0.52
GABRA4P48169 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
GABRA4P48169 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
GABRA4P48169 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.29■□□□□ 0.52
GABRA4P48169 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.29■□□□□ 0.52
GABRA4P48169 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GABRA4P48169 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.29■□□□□ 0.52
GABRA4P48169 SLC25A3P1-201ENST00000443844 931 ntBASIC18.29■□□□□ 0.52
GABRA4P48169 KRT18P21-201ENST00000515767 1272 ntBASIC18.29■□□□□ 0.52
GABRA4P48169 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 AL023803.3-201ENST00000615559 522 ntBASIC18.29■□□□□ 0.52
GABRA4P48169 AC005363.2-201ENST00000618631 242 ntBASIC18.29■□□□□ 0.52
GABRA4P48169 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GABRA4P48169 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
GABRA4P48169 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC18.29■□□□□ 0.52
GABRA4P48169 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.29■□□□□ 0.52
GABRA4P48169 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
GABRA4P48169 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
GABRA4P48169 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
GABRA4P48169 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRA4P48169 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GABRA4P48169 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.28■□□□□ 0.52
GABRA4P48169 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
GABRA4P48169 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 AC113347.1-201ENST00000413321 391 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 ECEL1P2-202ENST00000465689 757 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.28■□□□□ 0.52
GABRA4P48169 PRSS44-201ENST00000515154 1146 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.28■□□□□ 0.52
GABRA4P48169 FAM87A-204ENST00000613235 858 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.28■□□□□ 0.52
GABRA4P48169 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 AC073508.3-201ENST00000619697 1419 ntBASIC18.28■□□□□ 0.52
GABRA4P48169 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.28■□□□□ 0.52
GABRA4P48169 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC18.28■□□□□ 0.52
GABRA4P48169 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
GABRA4P48169 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
GABRA4P48169 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
GABRA4P48169 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
GABRA4P48169 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRA4P48169 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
GABRA4P48169 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
GABRA4P48169 AC092338.2-201ENST00000568827 1415 ntBASIC18.27■□□□□ 0.52
GABRA4P48169 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRA4P48169 SLC25A1P2-201ENST00000430693 912 ntBASIC18.27■□□□□ 0.52
GABRA4P48169 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
GABRA4P48169 CA15P1-201ENST00000481698 905 ntBASIC18.27■□□□□ 0.52
GABRA4P48169 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.27■□□□□ 0.52
GABRA4P48169 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC18.27■□□□□ 0.52
GABRA4P48169 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.27■□□□□ 0.51
GABRA4P48169 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
GABRA4P48169 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
GABRA4P48169 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
GABRA4P48169 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.26■□□□□ 0.51
GABRA4P48169 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms