Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
EPHA3P29320 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
EPHA3P29320 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.75■□□□□ 0.59
EPHA3P29320 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.75■□□□□ 0.59
EPHA3P29320 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
EPHA3P29320 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.75■□□□□ 0.59
EPHA3P29320 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
EPHA3P29320 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.75■□□□□ 0.59
EPHA3P29320 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
EPHA3P29320 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 Z98044.1-201ENST00000632503 1764 ntBASIC18.74■□□□□ 0.59
EPHA3P29320 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.74■□□□□ 0.59
EPHA3P29320 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.74■□□□□ 0.59
EPHA3P29320 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.74■□□□□ 0.59
EPHA3P29320 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.74■□□□□ 0.59
EPHA3P29320 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC18.74■□□□□ 0.59
EPHA3P29320 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
EPHA3P29320 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
EPHA3P29320 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
EPHA3P29320 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
EPHA3P29320 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
EPHA3P29320 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHA3P29320 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
EPHA3P29320 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 AL512625.2-201ENST00000417533 625 ntBASIC18.73■□□□□ 0.59
EPHA3P29320 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.73■□□□□ 0.59
EPHA3P29320 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 MAZ-216ENST00000616501 991 ntTSL 5 BASIC18.73■□□□□ 0.59
EPHA3P29320 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.73■□□□□ 0.59
EPHA3P29320 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
EPHA3P29320 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 AC093525.10-201ENST00000625130 1569 ntBASIC18.72■□□□□ 0.59
EPHA3P29320 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
EPHA3P29320 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHA3P29320 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
EPHA3P29320 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
EPHA3P29320 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHA3P29320 LSM12P1-201ENST00000411836 588 ntBASIC18.72■□□□□ 0.59
EPHA3P29320 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.72■□□□□ 0.59
EPHA3P29320 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.72■□□□□ 0.59
EPHA3P29320 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.72■□□□□ 0.59
EPHA3P29320 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 AC104417.2-201ENST00000562989 1793 ntBASIC18.72■□□□□ 0.59
EPHA3P29320 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
EPHA3P29320 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
EPHA3P29320 AL512353.2-201ENST00000448759 1962 ntBASIC18.72■□□□□ 0.59
EPHA3P29320 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
EPHA3P29320 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms