Protein–RNA interactions for Protein: P28070

PSMB4, Proteasome subunit beta type-4, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4P28070 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 CD99P1-205ENST00000527459 561 ntBASIC19.62■□□□□ 0.73
PSMB4P28070 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.62■□□□□ 0.73
PSMB4P28070 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.62■□□□□ 0.73
PSMB4P28070 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PSMB4P28070 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 AC004264.1-201ENST00000608354 794 ntBASIC19.62■□□□□ 0.73
PSMB4P28070 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.62■□□□□ 0.73
PSMB4P28070 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.62■□□□□ 0.73
PSMB4P28070 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 AIRN-201ENST00000601203 4374 ntBASIC19.62■□□□□ 0.73
PSMB4P28070 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PSMB4P28070 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.61■□□□□ 0.73
PSMB4P28070 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.61■□□□□ 0.73
PSMB4P28070 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 AC006058.3-201ENST00000606217 1069 ntBASIC19.61■□□□□ 0.73
PSMB4P28070 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.61■□□□□ 0.73
PSMB4P28070 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.61■□□□□ 0.73
PSMB4P28070 AC073648.6-201ENST00000641589 218 ntBASIC19.61■□□□□ 0.73
PSMB4P28070 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
PSMB4P28070 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.61■□□□□ 0.73
PSMB4P28070 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PSMB4P28070 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PSMB4P28070 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
PSMB4P28070 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.6■□□□□ 0.73
PSMB4P28070 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 HLA-A-209ENST00000638375 975 ntBASIC19.6■□□□□ 0.73
PSMB4P28070 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.6■□□□□ 0.73
PSMB4P28070 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PSMB4P28070 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMB4P28070 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.59■□□□□ 0.73
PSMB4P28070 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.59■□□□□ 0.73
PSMB4P28070 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.59■□□□□ 0.73
PSMB4P28070 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.59■□□□□ 0.73
PSMB4P28070 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PSMB4P28070 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
PSMB4P28070 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
PSMB4P28070 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.59■□□□□ 0.73
PSMB4P28070 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PSMB4P28070 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms